Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC069262.1-201ENST00000539058 672 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AP001160.2-201ENST00000596071 487 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 RN7SL828P-201ENST00000607615 303 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 AL133215.2-201ENST00000609242 977 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 SPDYE17-201ENST00000412399 783 ntBASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC139530.3-201ENST00000620344 690 ntBASIC14.16□□□□□ -0.14
TMEM54Q969K7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM54Q969K7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.16□□□□□ -0.14
TMEM54Q969K7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 PHKG1P2-201ENST00000457537 863 ntBASIC14.15□□□□□ -0.14
TMEM54Q969K7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM54Q969K7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM54Q969K7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms