Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AC011477.6-201ENST00000604980 1927 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 ZNF259P1-201ENST00000407656 1365 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AC092474.2-201ENST00000424288 719 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AP002414.2-201ENST00000591780 3365 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 AC006486.2-201ENST00000624246 2199 ntBASIC14.53□□□□□ -0.08
PTP4A1Q93096 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.52□□□□□ -0.08
PTP4A1Q93096 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.52□□□□□ -0.08
PTP4A1Q93096 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.52□□□□□ -0.08
PTP4A1Q93096 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.52□□□□□ -0.08
PTP4A1Q93096 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.52□□□□□ -0.08
PTP4A1Q93096 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTP4A1Q93096 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 IGLL3P-201ENST00000412472 434 ntBASIC14.52□□□□□ -0.09
PTP4A1Q93096 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.52□□□□□ -0.09
PTP4A1Q93096 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 TMBIM7P-203ENST00000641617 1718 ntBASIC14.52□□□□□ -0.09
PTP4A1Q93096 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTP4A1Q93096 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.52□□□□□ -0.09
PTP4A1Q93096 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 CICP4-201ENST00000447359 2812 ntBASIC14.51□□□□□ -0.09
PTP4A1Q93096 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC104109.2-201ENST00000602919 1418 ntBASIC14.51□□□□□ -0.09
PTP4A1Q93096 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms