Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC090616.6-203ENST00000579186 1945 ntBASIC14.28□□□□□ -0.12
AP3S1Q92572 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
AP3S1Q92572 LINC00552-201ENST00000625151 2579 ntBASIC14.28□□□□□ -0.12
AP3S1Q92572 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 AC005622.1-201ENST00000636801 1703 ntBASIC14.28□□□□□ -0.12
AP3S1Q92572 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S1Q92572 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
AP3S1Q92572 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.27□□□□□ -0.12
AP3S1Q92572 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP3S1Q92572 AC105250.1-201ENST00000509378 2057 ntBASIC14.27□□□□□ -0.12
AP3S1Q92572 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.27□□□□□ -0.12
AP3S1Q92572 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AP3S1Q92572 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.27□□□□□ -0.12
AP3S1Q92572 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.27□□□□□ -0.12
AP3S1Q92572 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
AP3S1Q92572 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP3S1Q92572 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP3S1Q92572 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S1Q92572 KRT18P22-201ENST00000402024 1347 ntBASIC14.27□□□□□ -0.12
AP3S1Q92572 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 MMP23A-201ENST00000234610 1017 ntBASIC14.27□□□□□ -0.13
AP3S1Q92572 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 SPDYE21P-201ENST00000413323 827 ntBASIC14.27□□□□□ -0.13
AP3S1Q92572 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.27□□□□□ -0.13
AP3S1Q92572 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
AP3S1Q92572 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.27□□□□□ -0.13
AP3S1Q92572 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.27□□□□□ -0.13
AP3S1Q92572 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.27□□□□□ -0.13
AP3S1Q92572 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
AP3S1Q92572 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
AP3S1Q92572 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
AP3S1Q92572 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.27□□□□□ -0.13
AP3S1Q92572 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S1Q92572 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 AL590787.1-201ENST00000568856 1315 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 GCSHP5-201ENST00000443090 522 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
AP3S1Q92572 AC090616.6-201ENST00000582640 721 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.26□□□□□ -0.13
AP3S1Q92572 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
AP3S1Q92572 AP001350.2-201ENST00000625104 1094 ntBASIC14.26□□□□□ -0.13
AP3S1Q92572 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S1Q92572 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S1Q92572 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S1Q92572 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms