Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.92■□□□□ 0.62
STAG1Q8WVM7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 MRPS18AP1-201ENST00000414458 589 ntBASIC18.92■□□□□ 0.62
STAG1Q8WVM7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 FAM207CP-201ENST00000443486 507 ntBASIC18.92■□□□□ 0.62
STAG1Q8WVM7 ZNF890P-202ENST00000530367 1156 ntBASIC18.92■□□□□ 0.62
STAG1Q8WVM7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
STAG1Q8WVM7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 COX20P2-201ENST00000452636 358 ntBASIC18.91■□□□□ 0.62
STAG1Q8WVM7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 RN7SL618P-201ENST00000477850 296 ntBASIC18.91■□□□□ 0.62
STAG1Q8WVM7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 LINC02560-201ENST00000596379 459 ntBASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 MIR6069-201ENST00000620069 79 ntBASIC18.91■□□□□ 0.62
STAG1Q8WVM7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
STAG1Q8WVM7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.9■□□□□ 0.62
STAG1Q8WVM7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC009407.1-201ENST00000568958 598 ntBASIC18.9■□□□□ 0.62
STAG1Q8WVM7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC008761.3-201ENST00000624803 892 ntBASIC18.9■□□□□ 0.62
STAG1Q8WVM7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 AC010491.1-201ENST00000563101 2797 ntBASIC18.9■□□□□ 0.62
STAG1Q8WVM7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
STAG1Q8WVM7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
STAG1Q8WVM7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
STAG1Q8WVM7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
STAG1Q8WVM7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms