Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC139887.3-201ENST00000568585 713 ntBASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PI4KAP1-204ENST00000612579 1703 ntBASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC136621.1-201ENST00000624017 2304 ntBASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IL1Q8TBN0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 NKAPP1-205ENST00000585790 367 ntBASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 AC004706.3-202ENST00000621574 984 ntBASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IL1Q8TBN0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB3IL1Q8TBN0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB3IL1Q8TBN0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.14■□□□□ 0.18
RAB3IL1Q8TBN0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
RAB3IL1Q8TBN0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RAB3IL1Q8TBN0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms