Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FAM58DP-201ENST00000428076 619 ntBASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AP000344.2-201ENST00000512987 629 ntBASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDH19Q8TAB3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDH19Q8TAB3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 AL136982.4-201ENST00000437689 1740 ntBASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDH19Q8TAB3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AC005237.2-201ENST00000434368 219 ntBASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 AL139384.1-201ENST00000612143 3047 ntBASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH19Q8TAB3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH19Q8TAB3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms