Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC126177.1-201ENST00000547829 2218 ntBASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 U82695.1-201ENST00000635752 1889 ntBASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 AC069335.1-201ENST00000489972 472 ntBASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 AC093520.2-201ENST00000561830 333 ntBASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 AL589702.1-201ENST00000641229 1509 ntBASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
SIMC1Q8NDZ2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 AC004461.1-201ENST00000412461 403 ntBASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ACTG1P14-201ENST00000446382 1122 ntBASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 MIR3687-2-201ENST00000577708 61 ntBASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 MIR3687-1-201ENST00000614492 61 ntBASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 AC008267.7-201ENST00000624570 1194 ntBASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
SIMC1Q8NDZ2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms