Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL138828.2-201ENST00000615812 383 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 SPDYE12P-201ENST00000618416 771 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 REXO1L1P-202ENST00000608646 1974 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC022188.1-201ENST00000620960 1664 ntBASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC4Q8N9L1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 FO538757.1-201ENST00000623083 1397 ntBASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 TREML5P-201ENST00000421694 576 ntBASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 AC093512.1-201ENST00000617969 520 ntBASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
ZIC4Q8N9L1 AC008894.3-201ENST00000624324 3103 ntBASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC018892.3-201ENST00000623986 2499 ntBASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 MIR943-201ENST00000401286 94 ntBASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 AC073592.8-201ENST00000624126 511 ntBASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ZIC4Q8N9L1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
ZIC4Q8N9L1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC4Q8N9L1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC4Q8N9L1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.21□□□□□ -0.14
ZIC4Q8N9L1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC4Q8N9L1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms