Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 ZNF890P-202ENST00000530367 1156 ntBASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PHTF2Q8N3S3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 SERPINA7P1-201ENST00000443077 631 ntBASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PHTF2Q8N3S3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC105917.1-201ENST00000506637 2539 ntBASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 AC024909.3-201ENST00000611513 2257 ntBASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHTF2Q8N3S3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms