Protein–RNA interactions for Protein: Q8N1G4

LRRC47, Leucine-rich repeat-containing protein 47, humanhuman

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47Q8N1G4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 RN7SL692P-201ENST00000464677 288 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC023310.3-201ENST00000557027 670 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC100756.1-201ENST00000562736 682 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 WASH4P-201ENST00000564273 1246 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC138749.3-201ENST00000567691 622 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 CHCHD2P3-201ENST00000603038 451 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 LINC01115-203ENST00000606068 577 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC116165.1-201ENST00000611806 668 ntBASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
LRRC47Q8N1G4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 DFFBP1-201ENST00000433250 979 ntBASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC47Q8N1G4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TPRX2P-201ENST00000535362 881 ntBASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AL596325.1-201ENST00000563991 1082 ntBASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TP53TG3HP-202ENST00000569755 579 ntBASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 AC140912.1-201ENST00000577171 1054 ntBASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC47Q8N1G4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms