Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 AC008741.2-201ENST00000612792 3115 ntBASIC17.52■□□□□ 0.4
VPS52Q8N1B4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 TP53TG3HP-202ENST00000569755 579 ntBASIC17.52■□□□□ 0.4
VPS52Q8N1B4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 AC004840.1-201ENST00000636359 365 ntBASIC17.52■□□□□ 0.4
VPS52Q8N1B4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS52Q8N1B4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.52■□□□□ 0.39
VPS52Q8N1B4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS52Q8N1B4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 KRT17P7-201ENST00000451704 1104 ntBASIC17.51■□□□□ 0.39
VPS52Q8N1B4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.51■□□□□ 0.39
VPS52Q8N1B4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.51■□□□□ 0.39
VPS52Q8N1B4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VPS52Q8N1B4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 CU639417.3-201ENST00000624240 1404 ntBASIC17.5■□□□□ 0.39
VPS52Q8N1B4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 AL080243.2-201ENST00000418783 582 ntBASIC17.5■□□□□ 0.39
VPS52Q8N1B4 AL353779.1-201ENST00000434793 351 ntBASIC17.5■□□□□ 0.39
VPS52Q8N1B4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS52Q8N1B4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms