Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 ME2P1-201ENST00000426028 1970 ntBASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC074338.1-201ENST00000416825 156 ntBASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FGFR3P5-201ENST00000564496 886 ntBASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AL645939.5-201ENST00000606834 243 ntBASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 DRD5P1-201ENST00000456605 1438 ntBASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 RPL13AP25-201ENST00000484130 612 ntBASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 UPF3AP2-201ENST00000457924 1132 ntBASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 AC016694.1-201ENST00000434179 700 ntBASIC9.75□□□□□ -0.85
VPS13BQ7Z7G8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms