Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAPH1Q70E73 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
RAPH1Q70E73 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 PMS2P4-201ENST00000412466 1052 ntBASIC16.29■□□□□ 0.2
RAPH1Q70E73 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 PRSS29P-201ENST00000440800 595 ntBASIC16.29■□□□□ 0.2
RAPH1Q70E73 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 AL031432.2-201ENST00000566714 459 ntBASIC16.29■□□□□ 0.2
RAPH1Q70E73 AL928711.1-201ENST00000570165 459 ntBASIC16.29■□□□□ 0.2
RAPH1Q70E73 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 AL645728.2-201ENST00000641974 660 ntBASIC16.29■□□□□ 0.2
RAPH1Q70E73 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
RAPH1Q70E73 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAPH1Q70E73 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 PCDHA3-202ENST00000532566 4594 ntBASIC16.28■□□□□ 0.2
RAPH1Q70E73 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 TNRC18P2-201ENST00000417666 2714 ntBASIC16.28■□□□□ 0.2
RAPH1Q70E73 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
RAPH1Q70E73 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAPH1Q70E73 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAPH1Q70E73 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAPH1Q70E73 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RAPH1Q70E73 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.27■□□□□ 0.2
RAPH1Q70E73 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
RAPH1Q70E73 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAPH1Q70E73 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAPH1Q70E73 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms