Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AP001350.2-201ENST00000625104 1094 ntBASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATPAF1Q5TC12 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AC131009.4-201ENST00000624048 1740 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AL022342.1-201ENST00000400363 863 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 MIR4515-201ENST00000584082 81 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AC007064.4-201ENST00000637740 555 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 AL645728.2-201ENST00000641974 660 ntBASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ATPAF1Q5TC12 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 FAM45BP-202ENST00000592932 1624 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 MIR574-201ENST00000385209 96 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 KRT18P3-201ENST00000451602 1288 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 RNA5SP416-201ENST00000516838 111 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 KRT18P58-201ENST00000527480 1120 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 AC087641.1-201ENST00000557561 1021 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 SLC22A20-204ENST00000530038 1673 ntBASIC14.06□□□□□ -0.16
ATPAF1Q5TC12 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms