Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 AC132008.2-207ENST00000454517 770 ntBASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 AC004706.3-202ENST00000621574 984 ntBASIC14.52□□□□□ -0.09
CCDC58Q4VC31 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 PTCHD3P3-201ENST00000403073 906 ntBASIC14.51□□□□□ -0.09
CCDC58Q4VC31 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.51□□□□□ -0.09
CCDC58Q4VC31 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC58Q4VC31 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 IER3-202ENST00000376377 1350 ntBASIC14.5□□□□□ -0.09
CCDC58Q4VC31 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AC129492.6-201ENST00000611383 1305 ntBASIC14.5□□□□□ -0.09
CCDC58Q4VC31 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms