Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.92□□□□□ -0.02
PRKCDQ05655 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.92□□□□□ -0.02
PRKCDQ05655 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.92□□□□□ -0.02
PRKCDQ05655 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 NORAD-201ENST00000565493 5339 ntBASIC14.92□□□□□ -0.02
PRKCDQ05655 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PRKCDQ05655 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKCDQ05655 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKCDQ05655 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCDQ05655 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCDQ05655 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
PRKCDQ05655 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKCDQ05655 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.91□□□□□ -0.02
PRKCDQ05655 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCDQ05655 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCDQ05655 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.91□□□□□ -0.02
PRKCDQ05655 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKCDQ05655 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKCDQ05655 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
PRKCDQ05655 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRKCDQ05655 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PRKCDQ05655 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRKCDQ05655 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKCDQ05655 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKCDQ05655 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCDQ05655 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKCDQ05655 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PRKCDQ05655 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
PRKCDQ05655 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms