Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 AC018892.3-201ENST00000623986 2499 ntBASIC19.67■□□□□ 0.74
SCN7AQ01118 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.66■□□□□ 0.74
SCN7AQ01118 MIR1202-201ENST00000408529 83 ntBASIC19.66■□□□□ 0.74
SCN7AQ01118 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN7AQ01118 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN7AQ01118 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.66■□□□□ 0.74
SCN7AQ01118 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN7AQ01118 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN7AQ01118 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN7AQ01118 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 KRT8P35-201ENST00000483942 1338 ntBASIC19.66■□□□□ 0.74
SCN7AQ01118 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN7AQ01118 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN7AQ01118 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN7AQ01118 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC006001.1-201ENST00000325130 474 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 HSPB1P2-201ENST00000448722 546 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 AC104306.2-201ENST00000451877 341 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 KRT8P13-201ENST00000463294 1010 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 ACTG1P17-201ENST00000558391 1119 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 MIR4741-201ENST00000579822 90 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN7AQ01118 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCN7AQ01118 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN7AQ01118 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN7AQ01118 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN7AQ01118 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.65■□□□□ 0.74
SCN7AQ01118 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC145423.3-201ENST00000615987 467 ntBASIC19.65■□□□□ 0.74
SCN7AQ01118 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN7AQ01118 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN7AQ01118 AC022211.2-201ENST00000585075 2527 ntBASIC19.64■□□□□ 0.74
SCN7AQ01118 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 MTHFR-217ENST00000641820 1569 ntBASIC19.64■□□□□ 0.74
SCN7AQ01118 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 AC092171.3-201ENST00000610122 2651 ntBASIC19.64■□□□□ 0.74
SCN7AQ01118 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN7AQ01118 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN7AQ01118 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms