Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.73■□□□□ 0.11
YBX1P67809 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 SPDYE14P-201ENST00000442619 822 ntBASIC15.73■□□□□ 0.11
YBX1P67809 AC092183.1-201ENST00000469884 875 ntBASIC15.73■□□□□ 0.11
YBX1P67809 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.73■□□□□ 0.11
YBX1P67809 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.73■□□□□ 0.11
YBX1P67809 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
YBX1P67809 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.72■□□□□ 0.11
YBX1P67809 TSEN15P1-201ENST00000423257 515 ntBASIC15.72■□□□□ 0.11
YBX1P67809 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.72■□□□□ 0.11
YBX1P67809 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 ALG1L8P-201ENST00000533887 760 ntBASIC15.72■□□□□ 0.11
YBX1P67809 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.72■□□□□ 0.11
YBX1P67809 AC026150.2-201ENST00000564693 1156 ntBASIC15.72■□□□□ 0.11
YBX1P67809 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AC079781.4-201ENST00000641908 219 ntBASIC15.72■□□□□ 0.11
YBX1P67809 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
YBX1P67809 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YBX1P67809 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
YBX1P67809 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.71■□□□□ 0.11
YBX1P67809 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
YBX1P67809 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.71■□□□□ 0.11
YBX1P67809 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YBX1P67809 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
YBX1P67809 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms