Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP4BP1P59074 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AP005018.1-201ENST00000525475 301 ntBASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AC005225.4-201ENST00000557330 545 ntBASIC18.48■□□□□ 0.55
CHMP4BP1P59074 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AC004233.3-201ENST00000607794 1269 ntBASIC18.48■□□□□ 0.55
CHMP4BP1P59074 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AL138828.2-201ENST00000615812 383 ntBASIC18.48■□□□□ 0.55
CHMP4BP1P59074 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PAUPAR-201ENST00000630360 2965 ntBASIC18.48■□□□□ 0.55
CHMP4BP1P59074 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP4BP1P59074 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AC004890.2-204ENST00000481968 304 ntBASIC18.47■□□□□ 0.55
CHMP4BP1P59074 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 AC007967.4-201ENST00000614700 386 ntBASIC18.47■□□□□ 0.55
CHMP4BP1P59074 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP4BP1P59074 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms