Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.46□□□□□ -0.09
CLRN1P58418 ACTG1P14-201ENST00000446382 1122 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 TIMM8BP1-201ENST00000452384 211 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 IGHV3-62-201ENST00000520057 340 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.46□□□□□ -0.09
CLRN1P58418 AL138918.1-201ENST00000568306 659 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 AC027307.2-201ENST00000591252 911 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 AC026120.1-201ENST00000611536 926 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 AC008267.7-201ENST00000624570 1194 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 AC010491.1-201ENST00000563101 2797 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLRN1P58418 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.46□□□□□ -0.1
CLRN1P58418 CDC14C-201ENST00000428251 1719 ntBASIC14.46□□□□□ -0.1
CLRN1P58418 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLRN1P58418 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLRN1P58418 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLRN1P58418 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CLRN1P58418 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
CLRN1P58418 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLRN1P58418 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLRN1P58418 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CLRN1P58418 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 DNAJB3-201ENST00000446806 729 ntBASIC14.45□□□□□ -0.1
CLRN1P58418 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CLRN1P58418 SPTSSB-204ENST00000617024 1292 ntBASIC14.45□□□□□ -0.1
CLRN1P58418 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.45□□□□□ -0.1
CLRN1P58418 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLRN1P58418 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
CLRN1P58418 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLRN1P58418 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CLRN1P58418 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.44□□□□□ -0.1
CLRN1P58418 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
CLRN1P58418 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLRN1P58418 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLRN1P58418 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.44□□□□□ -0.1
CLRN1P58418 HTR5BP-201ENST00000430851 1154 ntBASIC14.44□□□□□ -0.1
CLRN1P58418 MKNK2P1-201ENST00000437526 628 ntBASIC14.44□□□□□ -0.1
CLRN1P58418 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 AC245100.5-201ENST00000452108 331 ntBASIC14.44□□□□□ -0.1
CLRN1P58418 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.44□□□□□ -0.1
CLRN1P58418 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.44□□□□□ -0.1
CLRN1P58418 AC098859.1-201ENST00000502915 1238 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms