Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN12P56749 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.1□□□□□ -0.15
CLDN12P56749 AC069148.1-201ENST00000608741 768 ntBASIC14.1□□□□□ -0.15
CLDN12P56749 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN12P56749 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 AC091951.1-201ENST00000512854 2465 ntBASIC14.1□□□□□ -0.15
CLDN12P56749 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN12P56749 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CLDN12P56749 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLDN12P56749 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN12P56749 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN12P56749 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ARMC10P1-201ENST00000313754 855 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDN12P56749 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ELK2BP-201ENST00000415014 1224 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 KRT16P4-201ENST00000453883 522 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDN12P56749 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 AC005412.3-201ENST00000580309 715 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 MTDHP3-201ENST00000594186 672 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 AL732292.2-201ENST00000609649 430 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 AC092119.3-201ENST00000612618 583 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 U82695.1-201ENST00000635752 1889 ntBASIC14.09□□□□□ -0.15
CLDN12P56749 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLDN12P56749 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN12P56749 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDN12P56749 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN12P56749 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDN12P56749 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN12P56749 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CLDN12P56749 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.08□□□□□ -0.15
CLDN12P56749 OR2I1P-210ENST00000642037 4691 ntBASIC14.08□□□□□ -0.15
CLDN12P56749 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CLDN12P56749 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDN12P56749 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.08□□□□□ -0.15
CLDN12P56749 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN12P56749 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLDN12P56749 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDN12P56749 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLDN12P56749 AC023908.3-201ENST00000564211 3047 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms