Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.39■□□□□ 0.05
NR1H2P55055 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.39■□□□□ 0.05
NR1H2P55055 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 AC092865.5-201ENST00000545435 363 ntBASIC15.39■□□□□ 0.05
NR1H2P55055 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 AC106730.1-201ENST00000566722 1090 ntBASIC15.39■□□□□ 0.05
NR1H2P55055 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
NR1H2P55055 MIR7706-201ENST00000613747 67 ntBASIC15.39■□□□□ 0.05
NR1H2P55055 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.39■□□□□ 0.05
NR1H2P55055 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 AL161772.1-201ENST00000610494 4412 ntBASIC15.39■□□□□ 0.05
NR1H2P55055 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NR1H2P55055 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H2P55055 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H2P55055 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 AC096633.1-201ENST00000422446 749 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 AC007967.3-201ENST00000434308 558 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 AC122714.2-201ENST00000502787 707 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 POLD2P1-201ENST00000511220 997 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 OR7E14P-202ENST00000530490 1290 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 AC021087.4-201ENST00000563761 564 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NR1H2P55055 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 AC097637.2-201ENST00000624096 1997 ntBASIC15.38■□□□□ 0.05
NR1H2P55055 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H2P55055 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NR1H2P55055 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H2P55055 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NR1H2P55055 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
NR1H2P55055 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H2P55055 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms