Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB3P54753 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
EPHB3P54753 AC022211.2-201ENST00000585075 2527 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB3P54753 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB3P54753 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB3P54753 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
EPHB3P54753 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB3P54753 AC080080.1-201ENST00000625121 2420 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB3P54753 AP001282.1-201ENST00000531301 1499 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
EPHB3P54753 HAUS4P1-201ENST00000406739 1145 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 AC098850.1-201ENST00000419919 790 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.76■□□□□ 0.27
EPHB3P54753 U91328.1-201ENST00000437528 223 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.76■□□□□ 0.27
EPHB3P54753 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.76■□□□□ 0.27
EPHB3P54753 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB3P54753 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.76■□□□□ 0.27
EPHB3P54753 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.76■□□□□ 0.27
EPHB3P54753 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB3P54753 TMEM261P1-201ENST00000604899 340 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 LINC01115-203ENST00000606068 577 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
EPHB3P54753 AC092171.3-201ENST00000610122 2651 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 FLJ38576-201ENST00000623820 2459 ntBASIC16.76■□□□□ 0.27
EPHB3P54753 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB3P54753 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
EPHB3P54753 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
EPHB3P54753 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB3P54753 CLK3P2-201ENST00000427566 1453 ntBASIC16.75■□□□□ 0.27
EPHB3P54753 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.75■□□□□ 0.27
EPHB3P54753 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB3P54753 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB3P54753 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.75■□□□□ 0.27
EPHB3P54753 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EPHB3P54753 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHB3P54753 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHB3P54753 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EPHB3P54753 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EPHB3P54753 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHB3P54753 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.74■□□□□ 0.27
EPHB3P54753 ATP5G2P4-201ENST00000442175 420 ntBASIC16.74■□□□□ 0.27
EPHB3P54753 RN7SL837P-201ENST00000463010 287 ntBASIC16.74■□□□□ 0.27
EPHB3P54753 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHB3P54753 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHB3P54753 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHB3P54753 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms