Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3M2P53677 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3M2P53677 REXO1L1P-202ENST00000608646 1974 ntBASIC17.31■□□□□ 0.36
AP3M2P53677 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3M2P53677 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3M2P53677 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
AP3M2P53677 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3M2P53677 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3M2P53677 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3M2P53677 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
AP3M2P53677 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP3M2P53677 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.3■□□□□ 0.36
AP3M2P53677 PMS2P2-201ENST00000425039 1128 ntBASIC17.3■□□□□ 0.36
AP3M2P53677 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3M2P53677 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.3■□□□□ 0.36
AP3M2P53677 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP3M2P53677 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3M2P53677 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.3■□□□□ 0.36
AP3M2P53677 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
AP3M2P53677 AC073592.8-201ENST00000624126 511 ntBASIC17.3■□□□□ 0.36
AP3M2P53677 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3M2P53677 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3M2P53677 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 PCDHA1-201ENST00000378133 2726 ntBASIC17.29■□□□□ 0.36
AP3M2P53677 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP3M2P53677 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.29■□□□□ 0.36
AP3M2P53677 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.29■□□□□ 0.36
AP3M2P53677 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 PHKG1P2-201ENST00000457537 863 ntBASIC17.29■□□□□ 0.36
AP3M2P53677 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.29■□□□□ 0.36
AP3M2P53677 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.29■□□□□ 0.36
AP3M2P53677 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3M2P53677 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3M2P53677 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.29■□□□□ 0.36
AP3M2P53677 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
AP3M2P53677 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3M2P53677 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3M2P53677 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3M2P53677 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
AP3M2P53677 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3M2P53677 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.28■□□□□ 0.36
AP3M2P53677 AL080243.2-201ENST00000418783 582 ntBASIC17.28■□□□□ 0.36
AP3M2P53677 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3M2P53677 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3M2P53677 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3M2P53677 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3M2P53677 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3M2P53677 AL450472.2-201ENST00000603663 1156 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms