Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC25A1P53007 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC25A1P53007 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC25A1P53007 CICP13-201ENST00000422015 2789 ntBASIC14.34□□□□□ -0.11
SLC25A1P53007 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLC25A1P53007 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC25A1P53007 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC25A1P53007 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SLC25A1P53007 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SLC25A1P53007 AC104109.2-201ENST00000602919 1418 ntBASIC14.33□□□□□ -0.11
SLC25A1P53007 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC25A1P53007 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC25A1P53007 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC25A1P53007 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC25A1P53007 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC25A1P53007 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC25A1P53007 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SLC25A1P53007 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC25A1P53007 KRT18P2-201ENST00000447938 1258 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 AC105233.2-201ENST00000523697 349 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 AF228730.5-201ENST00000530288 346 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
SLC25A1P53007 AC243562.2-201ENST00000561247 970 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 PDPK2P-202ENST00000562415 1191 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC25A1P53007 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SLC25A1P53007 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 AC006486.2-201ENST00000624246 2199 ntBASIC14.33□□□□□ -0.12
SLC25A1P53007 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC25A1P53007 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SLC25A1P53007 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC25A1P53007 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 AC105250.1-201ENST00000509378 2057 ntBASIC14.32□□□□□ -0.12
SLC25A1P53007 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 AP003680.1-201ENST00000598970 3660 ntBASIC14.32□□□□□ -0.12
SLC25A1P53007 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.32□□□□□ -0.12
SLC25A1P53007 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 AC112191.1-201ENST00000523689 701 ntBASIC14.32□□□□□ -0.12
SLC25A1P53007 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.32□□□□□ -0.12
SLC25A1P53007 AC061975.2-201ENST00000581722 295 ntBASIC14.32□□□□□ -0.12
SLC25A1P53007 SPTSSB-204ENST00000617024 1292 ntBASIC14.32□□□□□ -0.12
SLC25A1P53007 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC25A1P53007 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC25A1P53007 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC25A1P53007 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms