Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
CPT1AP50416 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPT1AP50416 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPT1AP50416 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPT1AP50416 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.72■□□□□ 0.43
CPT1AP50416 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.72■□□□□ 0.43
CPT1AP50416 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPT1AP50416 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPT1AP50416 REXO1L6P-201ENST00000603433 1515 ntBASIC17.72■□□□□ 0.43
CPT1AP50416 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 AC005229.1-201ENST00000392885 409 ntBASIC17.71■□□□□ 0.43
CPT1AP50416 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.71■□□□□ 0.43
CPT1AP50416 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.71■□□□□ 0.43
CPT1AP50416 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.71■□□□□ 0.43
CPT1AP50416 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.71■□□□□ 0.43
CPT1AP50416 AC124283.3-201ENST00000570869 594 ntBASIC17.71■□□□□ 0.43
CPT1AP50416 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 AL450472.2-201ENST00000603663 1156 ntBASIC17.71■□□□□ 0.43
CPT1AP50416 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CPT1AP50416 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.71■□□□□ 0.43
CPT1AP50416 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPT1AP50416 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPT1AP50416 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPT1AP50416 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPT1AP50416 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CPT1AP50416 REXO1L1P-202ENST00000608646 1974 ntBASIC17.7■□□□□ 0.42
CPT1AP50416 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPT1AP50416 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPT1AP50416 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 AC136604.1-201ENST00000418535 575 ntBASIC17.7■□□□□ 0.42
CPT1AP50416 KRT18P64-201ENST00000434946 1219 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms