Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASP4P49662 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASP4P49662 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.58■□□□□ 0.4
CASP4P49662 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CASP4P49662 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.57■□□□□ 0.4
CASP4P49662 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CASP4P49662 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CASP4P49662 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.57■□□□□ 0.4
CASP4P49662 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.57■□□□□ 0.4
CASP4P49662 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.57■□□□□ 0.4
CASP4P49662 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.57■□□□□ 0.4
CASP4P49662 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.57■□□□□ 0.4
CASP4P49662 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.57■□□□□ 0.4
CASP4P49662 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASP4P49662 AC011477.6-201ENST00000604980 1927 ntBASIC17.57■□□□□ 0.4
CASP4P49662 AL162727.3-201ENST00000635661 2787 ntBASIC17.57■□□□□ 0.4
CASP4P49662 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CASP4P49662 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.56■□□□□ 0.4
CASP4P49662 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CASP4P49662 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.56■□□□□ 0.4
CASP4P49662 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.56■□□□□ 0.4
CASP4P49662 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 AL139384.1-201ENST00000612143 3047 ntBASIC17.56■□□□□ 0.4
CASP4P49662 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.56■□□□□ 0.4
CASP4P49662 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CASP4P49662 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CASP4P49662 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASP4P49662 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CASP4P49662 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.55■□□□□ 0.4
CASP4P49662 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.55■□□□□ 0.4
CASP4P49662 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.55■□□□□ 0.4
CASP4P49662 LINC00628-201ENST00000628516 1289 ntBASIC17.55■□□□□ 0.4
CASP4P49662 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.55■□□□□ 0.4
CASP4P49662 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CASP4P49662 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASP4P49662 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.55■□□□□ 0.4
CASP4P49662 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms