Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CEACAM3P40198 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 SPDYE7P-202ENST00000420373 878 ntBASIC13.21□□□□□ -0.29
CEACAM3P40198 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.21□□□□□ -0.29
CEACAM3P40198 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.21□□□□□ -0.29
CEACAM3P40198 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.21□□□□□ -0.29
CEACAM3P40198 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 SLC25A39P2-201ENST00000537614 270 ntBASIC13.21□□□□□ -0.29
CEACAM3P40198 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.21□□□□□ -0.29
CEACAM3P40198 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.21□□□□□ -0.29
CEACAM3P40198 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.21□□□□□ -0.29
CEACAM3P40198 MIR4321-201ENST00000592276 80 ntBASIC13.21□□□□□ -0.29
CEACAM3P40198 GPALPP1-207ENST00000611650 899 ntBASIC13.21□□□□□ -0.29
CEACAM3P40198 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.21□□□□□ -0.29
CEACAM3P40198 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.21□□□□□ -0.29
CEACAM3P40198 AC139530.3-201ENST00000620344 690 ntBASIC13.21□□□□□ -0.29
CEACAM3P40198 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.21□□□□□ -0.3
CEACAM3P40198 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.21□□□□□ -0.3
CEACAM3P40198 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.21□□□□□ -0.3
CEACAM3P40198 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.21□□□□□ -0.3
CEACAM3P40198 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.21□□□□□ -0.3
CEACAM3P40198 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CEACAM3P40198 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
CEACAM3P40198 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.2□□□□□ -0.3
CEACAM3P40198 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 MIR648-201ENST00000385046 94 ntBASIC13.2□□□□□ -0.3
CEACAM3P40198 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CEACAM3P40198 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 AL353705.2-201ENST00000428243 662 ntBASIC13.2□□□□□ -0.3
CEACAM3P40198 RBPMS2P1-201ENST00000437762 623 ntBASIC13.2□□□□□ -0.3
CEACAM3P40198 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.2□□□□□ -0.3
CEACAM3P40198 ALG1L8P-201ENST00000533887 760 ntBASIC13.2□□□□□ -0.3
CEACAM3P40198 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.2□□□□□ -0.3
CEACAM3P40198 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.2□□□□□ -0.3
CEACAM3P40198 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 CYP2T1P-202ENST00000641596 2535 ntBASIC13.2□□□□□ -0.3
CEACAM3P40198 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms