Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC011477.6-201ENST00000604980 1927 ntBASIC16.25■□□□□ 0.19
LSP1P33241 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LSP1P33241 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LSP1P33241 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LSP1P33241 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 AC126365.1-201ENST00000578585 1514 ntBASIC16.24■□□□□ 0.19
LSP1P33241 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 AC091167.2-201ENST00000579581 588 ntBASIC16.24■□□□□ 0.19
LSP1P33241 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 AC124864.1-201ENST00000623408 392 ntBASIC16.24■□□□□ 0.19
LSP1P33241 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.24■□□□□ 0.19
LSP1P33241 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LSP1P33241 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
LSP1P33241 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LSP1P33241 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.23■□□□□ 0.19
LSP1P33241 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 SPDYE21P-201ENST00000413323 827 ntBASIC16.23■□□□□ 0.19
LSP1P33241 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.23■□□□□ 0.19
LSP1P33241 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.23■□□□□ 0.19
LSP1P33241 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 AC011840.4-201ENST00000578471 627 ntBASIC16.23■□□□□ 0.19
LSP1P33241 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 AL031432.5-201ENST00000641059 760 ntBASIC16.23■□□□□ 0.19
LSP1P33241 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
LSP1P33241 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 LINC01230-201ENST00000625222 3017 ntBASIC16.23■□□□□ 0.19
LSP1P33241 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LSP1P33241 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms