Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 AC022137.2-201ENST00000503482 481 ntBASIC17.36■□□□□ 0.37
HOXC8P31273 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 GNRHR2-203ENST00000581100 1187 ntBASIC17.36■□□□□ 0.37
HOXC8P31273 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HOXC8P31273 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC8P31273 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HOXC8P31273 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXC8P31273 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HOXC8P31273 ACTBP11-201ENST00000436287 1126 ntBASIC17.35■□□□□ 0.37
HOXC8P31273 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXC8P31273 AC106760.1-201ENST00000508690 800 ntBASIC17.35■□□□□ 0.37
HOXC8P31273 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXC8P31273 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXC8P31273 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXC8P31273 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXC8P31273 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXC8P31273 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXC8P31273 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXC8P31273 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HOXC8P31273 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC8P31273 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC8P31273 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
HOXC8P31273 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC8P31273 AL355864.2-201ENST00000447420 863 ntBASIC17.34■□□□□ 0.37
HOXC8P31273 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 AC007551.1-201ENST00000457394 519 ntBASIC17.34■□□□□ 0.37
HOXC8P31273 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXC8P31273 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.34■□□□□ 0.37
HOXC8P31273 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXC8P31273 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXC8P31273 MIR4525-201ENST00000580000 75 ntBASIC17.34■□□□□ 0.37
HOXC8P31273 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HOXC8P31273 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HOXC8P31273 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXC8P31273 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXC8P31273 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXC8P31273 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXC8P31273 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.33■□□□□ 0.37
HOXC8P31273 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HOXC8P31273 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXC8P31273 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HOXC8P31273 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXC8P31273 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms