Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CD40LGP29965 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40LGP29965 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 AC068472.1-201ENST00000474589 881 ntBASIC14.37□□□□□ -0.11
CD40LGP29965 DUX4L26-201ENST00000489078 1255 ntBASIC14.37□□□□□ -0.11
CD40LGP29965 AC122714.2-201ENST00000502787 707 ntBASIC14.37□□□□□ -0.11
CD40LGP29965 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.37□□□□□ -0.11
CD40LGP29965 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.37□□□□□ -0.11
CD40LGP29965 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CD40LGP29965 AL157888.1-201ENST00000631930 593 ntBASIC14.37□□□□□ -0.11
CD40LGP29965 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CD40LGP29965 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40LGP29965 AC105250.1-201ENST00000509378 2057 ntBASIC14.37□□□□□ -0.11
CD40LGP29965 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40LGP29965 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40LGP29965 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40LGP29965 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 AC063952.2-201ENST00000498792 1227 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 STK19B-204ENST00000512515 211 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 AC022616.7-201ENST00000525383 220 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.36□□□□□ -0.11
CD40LGP29965 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.36□□□□□ -0.11
CD40LGP29965 AC010654.1-201ENST00000615722 808 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 AC006011.2-201ENST00000621313 1158 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.36□□□□□ -0.11
CD40LGP29965 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CD40LGP29965 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40LGP29965 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD40LGP29965 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40LGP29965 C18orf15-201ENST00000623680 2534 ntBASIC14.36□□□□□ -0.11
CD40LGP29965 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD40LGP29965 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40LGP29965 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CD40LGP29965 LINC01230-201ENST00000625222 3017 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 KRT8P10-201ENST00000450021 1447 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms