Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.79■□□□□ 0.12
SDHBP21912 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 RN7SL769P-201ENST00000469386 295 ntBASIC15.79■□□□□ 0.12
SDHBP21912 AC068587.3-201ENST00000526613 355 ntBASIC15.79■□□□□ 0.12
SDHBP21912 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.79■□□□□ 0.12
SDHBP21912 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
SDHBP21912 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.79■□□□□ 0.12
SDHBP21912 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 U62317.3-201ENST00000608319 855 ntBASIC15.79■□□□□ 0.12
SDHBP21912 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.79■□□□□ 0.12
SDHBP21912 MIR7845-201ENST00000618396 99 ntBASIC15.79■□□□□ 0.12
SDHBP21912 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.79■□□□□ 0.12
SDHBP21912 AC008687.7-202ENST00000637404 953 ntBASIC15.79■□□□□ 0.12
SDHBP21912 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SDHBP21912 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SDHBP21912 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SDHBP21912 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.78■□□□□ 0.12
SDHBP21912 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.78■□□□□ 0.12
SDHBP21912 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.78■□□□□ 0.12
SDHBP21912 AC009486.1-201ENST00000569860 813 ntBASIC15.78■□□□□ 0.12
SDHBP21912 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.78■□□□□ 0.12
SDHBP21912 MIR4706-201ENST00000582134 82 ntBASIC15.78■□□□□ 0.12
SDHBP21912 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.78■□□□□ 0.12
SDHBP21912 AC009542.2-202ENST00000619004 1067 ntBASIC15.78■□□□□ 0.12
SDHBP21912 AC128714.1-201ENST00000637035 887 ntBASIC15.78■□□□□ 0.12
SDHBP21912 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SDHBP21912 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SDHBP21912 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.78■□□□□ 0.12
SDHBP21912 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SDHBP21912 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
SDHBP21912 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SDHBP21912 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms