Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL4P13236 AL442647.2-201ENST00000429864 857 ntBASIC15.12■□□□□ 0.01
CCL4P13236 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL4P13236 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL4P13236 BNIP3P42-201ENST00000454982 569 ntBASIC15.12■□□□□ 0.01
CCL4P13236 AC092658.1-201ENST00000505836 891 ntBASIC15.12■□□□□ 0.01
CCL4P13236 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL4P13236 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.12■□□□□ 0.01
CCL4P13236 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL4P13236 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL4P13236 AL359711.2-201ENST00000563105 872 ntBASIC15.12■□□□□ 0.01
CCL4P13236 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.12■□□□□ 0.01
CCL4P13236 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 BNIP3P29-201ENST00000598302 571 ntBASIC15.12■□□□□ 0.01
CCL4P13236 AC011447.5-201ENST00000616168 564 ntBASIC15.12■□□□□ 0.01
CCL4P13236 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL4P13236 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL4P13236 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL4P13236 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCL4P13236 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL4P13236 REXO1L6P-201ENST00000603433 1515 ntBASIC15.12■□□□□ 0.01
CCL4P13236 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CCL4P13236 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCL4P13236 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CCL4P13236 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL4P13236 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCL4P13236 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL4P13236 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 KRT43P-201ENST00000434019 910 ntBASIC15.11■□□□□ 0.01
CCL4P13236 AL162726.2-201ENST00000438986 1017 ntBASIC15.11■□□□□ 0.01
CCL4P13236 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL4P13236 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL4P13236 AC233724.13-201ENST00000598383 410 ntBASIC15.11■□□□□ 0.01
CCL4P13236 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL4P13236 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCL4P13236 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL4P13236 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL4P13236 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCL4P13236 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL4P13236 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCL4P13236 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL4P13236 BOLA2P3-201ENST00000404566 256 ntBASIC15.1■□□□□ 0.01
CCL4P13236 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms