Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 AC044860.1-202ENST00000559481 777 ntBASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40ALP0C0E4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AC098614.1-201ENST00000368528 745 ntBASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 GK-202ENST00000378941 458 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 DOC2GP-202ENST00000514950 1163 ntBASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AC104794.3-201ENST00000566840 1248 ntBASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40ALP0C0E4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 AC026691.1-201ENST00000602502 2017 ntBASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 FO393414.2-201ENST00000405153 598 ntBASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 POU5F1P6-201ENST00000466990 990 ntBASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40ALP0C0E4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms