Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 AL359075.1-203ENST00000462729 1002 ntBASIC12.57□□□□□ -0.4
CXCL1P09341 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL1P09341 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CXCL1P09341 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CXCL1P09341 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.57□□□□□ -0.4
CXCL1P09341 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 AL138831.2-201ENST00000606564 490 ntBASIC12.57□□□□□ -0.4
CXCL1P09341 AL139011.1-202ENST00000642063 584 ntBASIC12.57□□□□□ -0.4
CXCL1P09341 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL1P09341 MYO15B-237ENST00000642007 4893 ntBASIC12.57□□□□□ -0.4
CXCL1P09341 Z82170.1-201ENST00000625081 3192 ntBASIC12.57□□□□□ -0.4
CXCL1P09341 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL1P09341 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.57□□□□□ -0.4
CXCL1P09341 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CXCL1P09341 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CXCL1P09341 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CXCL1P09341 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.56□□□□□ -0.4
CXCL1P09341 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 MIR648-201ENST00000385046 94 ntBASIC12.56□□□□□ -0.4
CXCL1P09341 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CXCL1P09341 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 GUSBP12-201ENST00000513727 720 ntBASIC12.56□□□□□ -0.4
CXCL1P09341 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 DUX4L17-201ENST00000557360 1267 ntBASIC12.56□□□□□ -0.4
CXCL1P09341 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 AC145285.6-201ENST00000604632 637 ntBASIC12.56□□□□□ -0.4
CXCL1P09341 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CXCL1P09341 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CXCL1P09341 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.56□□□□□ -0.4
CXCL1P09341 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.56□□□□□ -0.4
CXCL1P09341 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.56□□□□□ -0.4
CXCL1P09341 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CXCL1P09341 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms