Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL5A2P05997 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.8■□□□□ 0.92
COL5A2P05997 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL5A2P05997 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.8■□□□□ 0.92
COL5A2P05997 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 AL662890.1-201ENST00000396818 632 ntBASIC20.8■□□□□ 0.92
COL5A2P05997 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.8■□□□□ 0.92
COL5A2P05997 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.8■□□□□ 0.92
COL5A2P05997 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.8■□□□□ 0.92
COL5A2P05997 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.8■□□□□ 0.92
COL5A2P05997 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.8■□□□□ 0.92
COL5A2P05997 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.8■□□□□ 0.92
COL5A2P05997 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL5A2P05997 AC132938.4-201ENST00000623835 848 ntBASIC20.8■□□□□ 0.92
COL5A2P05997 AC018470.1-201ENST00000624790 3129 ntBASIC20.8■□□□□ 0.92
COL5A2P05997 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL5A2P05997 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
COL5A2P05997 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 AIRN-201ENST00000601203 4374 ntBASIC20.79■□□□□ 0.92
COL5A2P05997 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COL5A2P05997 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 CD8B2-202ENST00000417670 633 ntBASIC20.79■□□□□ 0.92
COL5A2P05997 FNTAP2-201ENST00000430308 634 ntBASIC20.79■□□□□ 0.92
COL5A2P05997 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.79■□□□□ 0.92
COL5A2P05997 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.79■□□□□ 0.92
COL5A2P05997 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL5A2P05997 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL5A2P05997 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
COL5A2P05997 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.79■□□□□ 0.92
COL5A2P05997 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.78■□□□□ 0.92
COL5A2P05997 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.78■□□□□ 0.92
COL5A2P05997 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.78■□□□□ 0.92
COL5A2P05997 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.78■□□□□ 0.92
COL5A2P05997 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.78■□□□□ 0.92
COL5A2P05997 AL451050.2-201ENST00000606967 682 ntBASIC20.78■□□□□ 0.92
COL5A2P05997 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.78■□□□□ 0.92
COL5A2P05997 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 AC005052.1-201ENST00000625181 2492 ntBASIC20.78■□□□□ 0.92
COL5A2P05997 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 AP001094.4-201ENST00000579008 2176 ntBASIC20.78■□□□□ 0.92
COL5A2P05997 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL5A2P05997 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.77■□□□□ 0.92
COL5A2P05997 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 NUS1P3-201ENST00000423502 862 ntBASIC20.77■□□□□ 0.92
COL5A2P05997 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
COL5A2P05997 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.77■□□□□ 0.92
COL5A2P05997 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms