Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 MIR4321-201ENST00000592276 80 ntBASIC19.27■□□□□ 0.68
POLR3DP05423 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.27■□□□□ 0.68
POLR3DP05423 AL844908.2-201ENST00000609461 460 ntBASIC19.27■□□□□ 0.68
POLR3DP05423 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR3DP05423 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR3DP05423 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR3DP05423 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR3DP05423 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
POLR3DP05423 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR3DP05423 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
POLR3DP05423 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.27■□□□□ 0.67
POLR3DP05423 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
POLR3DP05423 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
POLR3DP05423 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
POLR3DP05423 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
POLR3DP05423 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR3DP05423 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR3DP05423 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.26■□□□□ 0.67
POLR3DP05423 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 AC009477.1-201ENST00000452936 217 ntBASIC19.26■□□□□ 0.67
POLR3DP05423 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.26■□□□□ 0.67
POLR3DP05423 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.26■□□□□ 0.67
POLR3DP05423 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.26■□□□□ 0.67
POLR3DP05423 AC009118.2-201ENST00000613275 655 ntBASIC19.26■□□□□ 0.67
POLR3DP05423 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
POLR3DP05423 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.26■□□□□ 0.67
POLR3DP05423 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
POLR3DP05423 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR3DP05423 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.25■□□□□ 0.67
POLR3DP05423 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.25■□□□□ 0.67
POLR3DP05423 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 AC009407.1-201ENST00000568958 598 ntBASIC19.25■□□□□ 0.67
POLR3DP05423 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
POLR3DP05423 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PCDHA1-201ENST00000378133 2726 ntBASIC19.25■□□□□ 0.67
POLR3DP05423 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 AL391005.1-201ENST00000623953 2435 ntBASIC19.25■□□□□ 0.67
POLR3DP05423 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR3DP05423 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR3DP05423 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR3DP05423 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms