Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TCRAP04437 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TCRAP04437 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TCRAP04437 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
TCRAP04437 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 ELK2BP-201ENST00000415014 1224 ntBASIC12.33□□□□□ -0.44
TCRAP04437 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.33□□□□□ -0.44
TCRAP04437 MTDHP3-201ENST00000594186 672 ntBASIC12.33□□□□□ -0.44
TCRAP04437 MTDHP4-201ENST00000600287 670 ntBASIC12.33□□□□□ -0.44
TCRAP04437 AC069148.1-201ENST00000608741 768 ntBASIC12.33□□□□□ -0.44
TCRAP04437 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 GGTLC5P-201ENST00000617623 998 ntBASIC12.33□□□□□ -0.44
TCRAP04437 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRAP04437 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRAP04437 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRAP04437 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRAP04437 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TCRAP04437 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 AC012569.1-201ENST00000591191 1524 ntBASIC12.32□□□□□ -0.44
TCRAP04437 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TCRAP04437 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.32□□□□□ -0.44
TCRAP04437 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.32□□□□□ -0.44
TCRAP04437 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 AC097376.2-205ENST00000610159 5334 ntBASIC12.32□□□□□ -0.44
TCRAP04437 AC006504.4-201ENST00000592118 1568 ntBASIC12.32□□□□□ -0.44
TCRAP04437 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRAP04437 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRAP04437 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.32□□□□□ -0.44
TCRAP04437 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRAP04437 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
TCRAP04437 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.32□□□□□ -0.44
TCRAP04437 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRAP04437 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRAP04437 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.32□□□□□ -0.44
TCRAP04437 AC021097.1-201ENST00000607902 574 ntBASIC12.32□□□□□ -0.44
TCRAP04437 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms