Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNB1P01574 AC068418.2-201ENST00000577309 3703 ntBASIC16.76■□□□□ 0.27
IFNB1P01574 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IFNB1P01574 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNB1P01574 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.76■□□□□ 0.27
IFNB1P01574 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.76■□□□□ 0.27
IFNB1P01574 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFNB1P01574 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
IFNB1P01574 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
IFNB1P01574 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.75■□□□□ 0.27
IFNB1P01574 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.75■□□□□ 0.27
IFNB1P01574 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.75■□□□□ 0.27
IFNB1P01574 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.75■□□□□ 0.27
IFNB1P01574 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.75■□□□□ 0.27
IFNB1P01574 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.75■□□□□ 0.27
IFNB1P01574 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.75■□□□□ 0.27
IFNB1P01574 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 AC016027.1-202ENST00000607927 1699 ntBASIC16.75■□□□□ 0.27
IFNB1P01574 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFNB1P01574 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.75■□□□□ 0.27
IFNB1P01574 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
IFNB1P01574 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.74■□□□□ 0.27
IFNB1P01574 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.74■□□□□ 0.27
IFNB1P01574 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.74■□□□□ 0.27
IFNB1P01574 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
IFNB1P01574 KRT126P-201ENST00000549467 1181 ntBASIC16.74■□□□□ 0.27
IFNB1P01574 AC104640.1-201ENST00000562617 2109 ntBASIC16.74■□□□□ 0.27
IFNB1P01574 SLC25A6P4-201ENST00000586535 553 ntBASIC16.74■□□□□ 0.27
IFNB1P01574 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 Z83851.2-201ENST00000609564 659 ntBASIC16.74■□□□□ 0.27
IFNB1P01574 AL078644.1-201ENST00000609881 752 ntBASIC16.74■□□□□ 0.27
IFNB1P01574 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
IFNB1P01574 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFNB1P01574 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.74■□□□□ 0.27
IFNB1P01574 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
IFNB1P01574 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNB1P01574 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFNB1P01574 BCAR1-209ENST00000546196 1340 ntBASIC16.73■□□□□ 0.27
IFNB1P01574 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
IFNB1P01574 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFNB1P01574 AC008677.1-201ENST00000519230 1561 ntBASIC16.73■□□□□ 0.27
IFNB1P01574 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
IFNB1P01574 AC126177.1-201ENST00000547829 2218 ntBASIC16.73■□□□□ 0.27
IFNB1P01574 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNB1P01574 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFNB1P01574 AC025580.3-201ENST00000617932 1424 ntBASIC16.73■□□□□ 0.27
IFNB1P01574 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms