Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 AC145423.3-201ENST00000615987 467 ntBASIC18.17■□□□□ 0.5
ALDH1A1P00352 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 CU633904.3-201ENST00000624042 1029 ntBASIC18.17■□□□□ 0.5
ALDH1A1P00352 AC008764.6-201ENST00000595909 2069 ntBASIC18.17■□□□□ 0.5
ALDH1A1P00352 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALDH1A1P00352 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ALDH1A1P00352 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 MIR769-201ENST00000390225 118 ntBASIC18.16■□□□□ 0.5
ALDH1A1P00352 AL133466.1-201ENST00000447582 150 ntBASIC18.16■□□□□ 0.5
ALDH1A1P00352 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 AC245884.6-201ENST00000515672 1067 ntBASIC18.16■□□□□ 0.5
ALDH1A1P00352 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 BNIP3P1-202ENST00000550043 1585 ntBASIC18.16■□□□□ 0.5
ALDH1A1P00352 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ALDH1A1P00352 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALDH1A1P00352 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.15■□□□□ 0.5
ALDH1A1P00352 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 MIR7845-201ENST00000618396 99 ntBASIC18.15■□□□□ 0.5
ALDH1A1P00352 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 AL138709.1-201ENST00000614840 1693 ntBASIC18.15■□□□□ 0.5
ALDH1A1P00352 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.15■□□□□ 0.5
ALDH1A1P00352 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALDH1A1P00352 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.14■□□□□ 0.5
ALDH1A1P00352 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.14■□□□□ 0.5
ALDH1A1P00352 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ALDH1A1P00352 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.14■□□□□ 0.5
ALDH1A1P00352 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALDH1A1P00352 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ALDH1A1P00352 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.14■□□□□ 0.5
ALDH1A1P00352 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
ALDH1A1P00352 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ALDH1A1P00352 AL121723.1-201ENST00000445194 1519 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.14■□□□□ 0.49
ALDH1A1P00352 AC067852.2-201ENST00000590513 2313 ntBASIC18.14■□□□□ 0.49
ALDH1A1P00352 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALDH1A1P00352 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms