Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 AP003680.1-201ENST00000598970 3660 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ABCA1O95477 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA1O95477 AC098859.1-201ENST00000502915 1238 ntBASIC13.56□□□□□ -0.24
ABCA1O95477 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCA1O95477 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 SPTSSB-204ENST00000617024 1292 ntBASIC13.56□□□□□ -0.24
ABCA1O95477 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 AC093525.9-201ENST00000624961 1746 ntBASIC13.56□□□□□ -0.24
ABCA1O95477 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA1O95477 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
ABCA1O95477 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCA1O95477 TTTY23B-201ENST00000442790 549 ntBASIC13.56□□□□□ -0.24
ABCA1O95477 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA1O95477 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA1O95477 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA1O95477 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA1O95477 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 AGGF1P2-201ENST00000426656 2106 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC018695.7-201ENST00000624587 2492 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCA1O95477 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC055876.2-201ENST00000531834 546 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
ABCA1O95477 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 AC105021.1-202ENST00000570572 669 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 AC008735.3-201ENST00000596646 500 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 AC007541.1-201ENST00000570282 1469 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 AC016396.2-201ENST00000562575 1417 ntBASIC13.55□□□□□ -0.24
ABCA1O95477 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ABCA1O95477 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA1O95477 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA1O95477 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms