Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
LGR5O75473 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.84■□□□□ 0.45
LGR5O75473 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.84■□□□□ 0.45
LGR5O75473 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.84■□□□□ 0.45
LGR5O75473 AC017083.2-201ENST00000608069 979 ntBASIC17.84■□□□□ 0.45
LGR5O75473 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.84■□□□□ 0.45
LGR5O75473 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LGR5O75473 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
LGR5O75473 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LGR5O75473 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.83■□□□□ 0.45
LGR5O75473 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
LGR5O75473 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.83■□□□□ 0.45
LGR5O75473 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LGR5O75473 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.83■□□□□ 0.44
LGR5O75473 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 AC074338.1-201ENST00000416825 156 ntBASIC17.83■□□□□ 0.44
LGR5O75473 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.83■□□□□ 0.44
LGR5O75473 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.83■□□□□ 0.44
LGR5O75473 RPL13P2-201ENST00000440687 659 ntBASIC17.83■□□□□ 0.44
LGR5O75473 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.83■□□□□ 0.44
LGR5O75473 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.83■□□□□ 0.44
LGR5O75473 LINC01115-203ENST00000606068 577 ntBASIC17.83■□□□□ 0.44
LGR5O75473 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.83■□□□□ 0.44
LGR5O75473 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LGR5O75473 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.83■□□□□ 0.44
LGR5O75473 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
LGR5O75473 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LGR5O75473 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LGR5O75473 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 AC006449.6-201ENST00000612330 2296 ntBASIC17.82■□□□□ 0.44
LGR5O75473 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.82■□□□□ 0.44
LGR5O75473 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LGR5O75473 RRP7BP-205ENST00000566851 833 ntBASIC17.82■□□□□ 0.44
LGR5O75473 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LGR5O75473 AL391069.4-201ENST00000609583 481 ntBASIC17.82■□□□□ 0.44
LGR5O75473 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LGR5O75473 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LGR5O75473 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.82■□□□□ 0.44
LGR5O75473 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.81■□□□□ 0.44
LGR5O75473 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LGR5O75473 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.81■□□□□ 0.44
LGR5O75473 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LGR5O75473 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.81■□□□□ 0.44
LGR5O75473 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.81■□□□□ 0.44
LGR5O75473 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LGR5O75473 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LGR5O75473 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms