Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
OPHN1O60890 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
OPHN1O60890 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 AC002056.1-201ENST00000395613 760 ntBASIC16.93■□□□□ 0.3
OPHN1O60890 AC005034.1-201ENST00000426657 489 ntBASIC16.93■□□□□ 0.3
OPHN1O60890 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
OPHN1O60890 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.93■□□□□ 0.3
OPHN1O60890 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
OPHN1O60890 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.93■□□□□ 0.3
OPHN1O60890 AC021097.1-201ENST00000607902 574 ntBASIC16.93■□□□□ 0.3
OPHN1O60890 AC009093.7-201ENST00000623853 1223 ntBASIC16.93■□□□□ 0.3
OPHN1O60890 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.93■□□□□ 0.3
OPHN1O60890 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.93■□□□□ 0.3
OPHN1O60890 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
OPHN1O60890 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.93■□□□□ 0.3
OPHN1O60890 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.93■□□□□ 0.3
OPHN1O60890 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.93■□□□□ 0.3
OPHN1O60890 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
OPHN1O60890 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
OPHN1O60890 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.93■□□□□ 0.3
OPHN1O60890 AC006449.6-201ENST00000612330 2296 ntBASIC16.93■□□□□ 0.3
OPHN1O60890 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
OPHN1O60890 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
OPHN1O60890 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 HMGA1P7-201ENST00000406908 502 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AL627223.1-201ENST00000416693 442 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.92■□□□□ 0.3
OPHN1O60890 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
OPHN1O60890 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AL035252.4-201ENST00000624174 288 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 Z92544.3-201ENST00000624747 417 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AF228730.6-201ENST00000641497 218 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AC084121.3-201ENST00000641716 218 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AC105233.6-201ENST00000642093 218 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
OPHN1O60890 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 AC063926.2-201ENST00000623766 1308 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 AC092919.2-201ENST00000623631 1645 ntBASIC16.92■□□□□ 0.3
OPHN1O60890 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
OPHN1O60890 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
OPHN1O60890 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
OPHN1O60890 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 AL596087.1-201ENST00000400979 1969 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
OPHN1O60890 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.91■□□□□ 0.3
OPHN1O60890 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.91■□□□□ 0.3
OPHN1O60890 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.91■□□□□ 0.3
OPHN1O60890 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.91■□□□□ 0.3
OPHN1O60890 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
OPHN1O60890 AC005237.2-201ENST00000434368 219 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 CNN2P2-201ENST00000443536 909 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 CNN2P3-201ENST00000450201 906 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.91■□□□□ 0.3
OPHN1O60890 FAM86C2P-203ENST00000528684 1004 ntBASIC16.91■□□□□ 0.3
OPHN1O60890 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
OPHN1O60890 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.91■□□□□ 0.3
OPHN1O60890 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.91■□□□□ 0.3
OPHN1O60890 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms