Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.7□□□□□ -0.38
CUBNO60494 AC022211.2-201ENST00000585075 2527 ntBASIC12.7□□□□□ -0.38
CUBNO60494 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CUBNO60494 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.7□□□□□ -0.38
CUBNO60494 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 AC099398.1-201ENST00000567919 2776 ntBASIC12.69□□□□□ -0.38
CUBNO60494 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.69□□□□□ -0.38
CUBNO60494 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.69□□□□□ -0.38
CUBNO60494 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CUBNO60494 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CUBNO60494 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.69□□□□□ -0.38
CUBNO60494 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CUBNO60494 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 FAM197Y7-201ENST00000432892 766 ntBASIC12.69□□□□□ -0.38
CUBNO60494 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.69□□□□□ -0.38
CUBNO60494 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.69□□□□□ -0.38
CUBNO60494 AL451050.2-201ENST00000606967 682 ntBASIC12.69□□□□□ -0.38
CUBNO60494 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.69□□□□□ -0.38
CUBNO60494 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 AHCYP2-201ENST00000430630 1300 ntBASIC12.69□□□□□ -0.38
CUBNO60494 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CUBNO60494 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 AC074338.1-201ENST00000416825 156 ntBASIC12.68□□□□□ -0.38
CUBNO60494 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.68□□□□□ -0.38
CUBNO60494 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.68□□□□□ -0.38
CUBNO60494 AP006547.1-201ENST00000563435 692 ntBASIC12.68□□□□□ -0.38
CUBNO60494 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 AP003419.4-201ENST00000616071 517 ntBASIC12.68□□□□□ -0.38
CUBNO60494 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 AL590640.2-201ENST00000457038 527 ntBASIC12.68□□□□□ -0.38
CUBNO60494 AL133499.1-201ENST00000596207 608 ntBASIC12.68□□□□□ -0.38
CUBNO60494 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.68□□□□□ -0.38
CUBNO60494 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 RHOXF1P1-202ENST00000635473 501 ntBASIC12.68□□□□□ -0.38
CUBNO60494 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CUBNO60494 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CUBNO60494 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.68□□□□□ -0.38
CUBNO60494 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms