Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCA5O60264 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SMARCA5O60264 MIR4453-201ENST00000584019 89 ntBASIC19.89■□□□□ 0.77
SMARCA5O60264 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AC003101.2-201ENST00000612557 442 ntBASIC19.89■□□□□ 0.77
SMARCA5O60264 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCA5O60264 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
SMARCA5O60264 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCA5O60264 AC105917.1-201ENST00000506637 2539 ntBASIC19.89■□□□□ 0.77
SMARCA5O60264 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SMARCA5O60264 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.88■□□□□ 0.77
SMARCA5O60264 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.88■□□□□ 0.77
SMARCA5O60264 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCA5O60264 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.88■□□□□ 0.77
SMARCA5O60264 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCA5O60264 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.88■□□□□ 0.77
SMARCA5O60264 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCA5O60264 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCA5O60264 AP001160.2-201ENST00000596071 487 ntBASIC19.88■□□□□ 0.77
SMARCA5O60264 AC018529.1-201ENST00000613063 361 ntBASIC19.88■□□□□ 0.77
SMARCA5O60264 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.88■□□□□ 0.77
SMARCA5O60264 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCA5O60264 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCA5O60264 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCA5O60264 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCA5O60264 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCA5O60264 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCA5O60264 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMARCA5O60264 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCA5O60264 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.87■□□□□ 0.77
SMARCA5O60264 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.87■□□□□ 0.77
SMARCA5O60264 LINC00628-201ENST00000628516 1289 ntBASIC19.87■□□□□ 0.77
SMARCA5O60264 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCA5O60264 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCA5O60264 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCA5O60264 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCA5O60264 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCA5O60264 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCA5O60264 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms