Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HOXA2O43364 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXA2O43364 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA2O43364 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXA2O43364 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA2O43364 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 SLC25A47P1-201ENST00000531577 414 ntBASIC17.12■□□□□ 0.33
HOXA2O43364 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MIR5189-201ENST00000577370 114 ntBASIC17.12■□□□□ 0.33
HOXA2O43364 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 MIR6775-201ENST00000617557 69 ntBASIC17.12■□□□□ 0.33
HOXA2O43364 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA2O43364 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA2O43364 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 INTS4P2-202ENST00000614726 2019 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HOXA2O43364 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HOXA2O43364 FZD10-202ENST00000539839 3282 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA2O43364 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HOXA2O43364 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA2O43364 AC136604.1-201ENST00000418535 575 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA2O43364 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXA2O43364 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA2O43364 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 TDH-203ENST00000531764 1110 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 PTP4A1P2-201ENST00000546033 454 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA2O43364 AL359711.2-201ENST00000563105 872 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 RPSAP52-203ENST00000622976 1023 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HOXA2O43364 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 AC009053.2-201ENST00000563701 2365 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
HOXA2O43364 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXA2O43364 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HOXA2O43364 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA2O43364 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA2O43364 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms