Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.17■□□□□ 0.98
APAF1O14727 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SPDYE17-201ENST00000412399 783 ntBASIC21.17■□□□□ 0.98
APAF1O14727 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.17■□□□□ 0.98
APAF1O14727 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 KLF2P3-201ENST00000451977 1087 ntBASIC21.17■□□□□ 0.98
APAF1O14727 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 DUX4L27-201ENST00000554796 1261 ntBASIC21.17■□□□□ 0.98
APAF1O14727 AL079307.3-201ENST00000556114 283 ntBASIC21.17■□□□□ 0.98
APAF1O14727 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
APAF1O14727 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.17■□□□□ 0.98
APAF1O14727 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
APAF1O14727 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
APAF1O14727 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
APAF1O14727 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 KRT8P37-201ENST00000451609 1420 ntBASIC21.16■□□□□ 0.98
APAF1O14727 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.16■□□□□ 0.98
APAF1O14727 RPL37AP1-201ENST00000412502 279 ntBASIC21.16■□□□□ 0.98
APAF1O14727 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.16■□□□□ 0.98
APAF1O14727 PMS2P2-201ENST00000425039 1128 ntBASIC21.16■□□□□ 0.98
APAF1O14727 HIST3H2BA-201ENST00000436555 524 ntBASIC21.16■□□□□ 0.98
APAF1O14727 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.16■□□□□ 0.98
APAF1O14727 EEF1DP4-201ENST00000446006 880 ntBASIC21.16■□□□□ 0.98
APAF1O14727 AC125807.1-201ENST00000483097 614 ntBASIC21.16■□□□□ 0.98
APAF1O14727 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.16■□□□□ 0.98
APAF1O14727 SPDYE12P-201ENST00000618416 771 ntBASIC21.16■□□□□ 0.98
APAF1O14727 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.16■□□□□ 0.98
APAF1O14727 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APAF1O14727 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
APAF1O14727 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
APAF1O14727 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.15■□□□□ 0.98
APAF1O14727 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.15■□□□□ 0.98
APAF1O14727 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
APAF1O14727 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.15■□□□□ 0.98
APAF1O14727 AL645939.2-201ENST00000427340 991 ntBASIC21.15■□□□□ 0.98
APAF1O14727 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.15■□□□□ 0.98
APAF1O14727 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.15■□□□□ 0.98
APAF1O14727 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.15■□□□□ 0.98
APAF1O14727 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.15■□□□□ 0.98
APAF1O14727 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.15■□□□□ 0.98
APAF1O14727 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 AL589739.1-201ENST00000607720 493 ntBASIC21.15■□□□□ 0.98
APAF1O14727 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.15■□□□□ 0.98
APAF1O14727 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
APAF1O14727 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APAF1O14727 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms