Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD1O14646 EIF3FP3-201ENST00000434851 1086 ntBASIC25.37■■□□□ 1.65
CHD1O14646 RPL18P13-201ENST00000478088 569 ntBASIC25.37■■□□□ 1.65
CHD1O14646 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 MIR4754-201ENST00000582477 89 ntBASIC25.37■■□□□ 1.65
CHD1O14646 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 IRF3-215ENST00000596822 823 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD1O14646 AC138894.2-201ENST00000602838 371 ntBASIC25.37■■□□□ 1.65
CHD1O14646 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CHD1O14646 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD1O14646 SLC25A24-204ENST00000569674 2357 ntBASIC25.37■■□□□ 1.65
CHD1O14646 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 AP001282.1-201ENST00000531301 1499 ntBASIC25.37■■□□□ 1.65
CHD1O14646 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CHD1O14646 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 AL138799.1-201ENST00000448213 1675 ntBASIC25.37■■□□□ 1.65
CHD1O14646 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 TPM3P8-201ENST00000330554 643 ntBASIC25.37■■□□□ 1.65
CHD1O14646 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHD1O14646 SERF2-206ENST00000409291 807 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD1O14646 CMC1-204ENST00000423894 549 ntTSL 2 BASIC25.37■■□□□ 1.65
CHD1O14646 AC010234.1-201ENST00000494599 870 ntBASIC25.37■■□□□ 1.65
CHD1O14646 AC242376.1-201ENST00000559033 726 ntBASIC25.37■■□□□ 1.65
CHD1O14646 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD1O14646 PCBP2-OT1-201ENST00000634357 590 ntBASIC25.37■■□□□ 1.65
CHD1O14646 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CHD1O14646 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
CHD1O14646 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC25.36■■□□□ 1.65
CHD1O14646 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD1O14646 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC25.36■■□□□ 1.65
CHD1O14646 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD1O14646 AC073150.1-201ENST00000450406 1084 ntBASIC25.36■■□□□ 1.65
CHD1O14646 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD1O14646 EID1-202ENST00000560490 584 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD1O14646 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
CHD1O14646 AL023803.2-201ENST00000620080 638 ntBASIC25.36■■□□□ 1.65
CHD1O14646 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 AC067852.2-201ENST00000590513 2313 ntBASIC25.36■■□□□ 1.65
CHD1O14646 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CHD1O14646 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD1O14646 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 DNAJB1P1-201ENST00000429417 1024 ntBASIC25.35■■□□□ 1.65
CHD1O14646 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC25.35■■□□□ 1.65
CHD1O14646 AC051619.9-201ENST00000623237 597 ntBASIC25.35■■□□□ 1.65
CHD1O14646 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC25.35■■□□□ 1.65
CHD1O14646 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CHD1O14646 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CHD1O14646 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CHD1O14646 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD1O14646 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC25.34■■□□□ 1.65
CHD1O14646 AC007881.3-201ENST00000608897 607 ntBASIC25.34■■□□□ 1.65
CHD1O14646 AC127024.7-201ENST00000625101 200 ntBASIC25.34■■□□□ 1.65
CHD1O14646 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD1O14646 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC25.34■■□□□ 1.65
CHD1O14646 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CHD1O14646 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD1O14646 NPPA-201ENST00000376476 728 ntTSL 3 BASIC25.34■■□□□ 1.65
CHD1O14646 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHD1O14646 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC25.34■■□□□ 1.65
CHD1O14646 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms