Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
C4orf47A7E2U8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C4orf47A7E2U8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
C4orf47A7E2U8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.71■□□□□ 0.1
C4orf47A7E2U8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.71■□□□□ 0.1
C4orf47A7E2U8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 RPL13AP20-201ENST00000459725 609 ntBASIC15.7■□□□□ 0.1
C4orf47A7E2U8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AP000812.2-201ENST00000538934 718 ntBASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AC091271.1-201ENST00000611877 1162 ntBASIC15.7■□□□□ 0.1
C4orf47A7E2U8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 AC006538.1-201ENST00000567905 1585 ntBASIC15.7■□□□□ 0.1
C4orf47A7E2U8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
C4orf47A7E2U8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AL355864.2-201ENST00000447420 863 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 KRT8P13-201ENST00000463294 1010 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 RNA5SP423-201ENST00000517127 109 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AP001889.1-201ENST00000525414 633 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC068587.3-201ENST00000526613 355 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AL359711.2-201ENST00000563105 872 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C4orf47A7E2U8 AC009542.2-202ENST00000619004 1067 ntBASIC15.69■□□□□ 0.1
C4orf47A7E2U8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms