Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.48□□□□□ -0.09
TVP23AA6NH52 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TVP23AA6NH52 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 IGHV3-22-201ENST00000520721 359 ntBASIC14.47□□□□□ -0.09
TVP23AA6NH52 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 AL009183.1-201ENST00000603760 355 ntBASIC14.47□□□□□ -0.09
TVP23AA6NH52 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.47□□□□□ -0.09
TVP23AA6NH52 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TVP23AA6NH52 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 RHOQP3-201ENST00000437982 621 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 AC093724.1-201ENST00000448659 1027 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 KRT18P34-201ENST00000488218 1270 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 AC018845.2-201ENST00000568326 409 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 SLC25A6P4-201ENST00000586535 553 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 AC023141.13-201ENST00000604991 943 ntBASIC14.46□□□□□ -0.09
TVP23AA6NH52 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TVP23AA6NH52 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TVP23AA6NH52 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.46□□□□□ -0.1
TVP23AA6NH52 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.46□□□□□ -0.1
TVP23AA6NH52 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TVP23AA6NH52 AC016027.1-202ENST00000607927 1699 ntBASIC14.46□□□□□ -0.1
TVP23AA6NH52 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TVP23AA6NH52 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TVP23AA6NH52 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TVP23AA6NH52 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms